CDS

Accession Number TCMCG077C13997
gbkey CDS
Protein Id KAF5739253.1
Location join(3145824..3145906,3146051..3146129,3146270..3146473,3146774..3146988,3147613..3147685,3148043..3148099,3149408..3149487,3149571..3149633,3149762..3149849,3151348..3151450,3151596..3151699,3151960..3152033,3152652..3152716,3152876..3153042,3154278..3154345,3154427..3154487,3154738..3154775,3154872..3154940,3155034..3155382,3155807..3155836)
Organism Tripterygium wilfordii
locus_tag HS088_TW12G00455

Protein

Length 689aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA542587, BioSample:SAMN11634134
db_source JAAARO010000012.1
Definition Pseudouridine synthase family protein isoform 2 [Tripterygium wilfordii]
Locus_tag HS088_TW12G00455

EGGNOG-MAPPER Annotation

COG_category L
Description Pseudouridine synthase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K06176        [VIEW IN KEGG]
EC 5.4.99.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000154        [VIEW IN EMBL-EBI]
GO:0000455        [VIEW IN EMBL-EBI]
GO:0001522        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005732        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006400        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009982        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016073        [VIEW IN EMBL-EBI]
GO:0016556        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0016866        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0031118        [VIEW IN EMBL-EBI]
GO:0031119        [VIEW IN EMBL-EBI]
GO:0031120        [VIEW IN EMBL-EBI]
GO:0031429        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0040031        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072588        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990481        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAAATCCCTCGACGAAGCTGACGTTGGCATCTTCTGCTTCATGTCGCAACTCCCTGGTTTTCGTGGCATTCTCAAGCAAAGGTATTCTGATTTTGTTGTCAATGAAGTGGATACTGATGGAAATGTTGTTCACTTGACTTGTTTGGATGCCCCTCTAGAGGTTGTGGAAGAAAATGATGCTAAAAGGCCTGACTCAAATTTAATGACTCGAAGTTATGCTTCTGAAGTTGAGGCGTTTAAGTCCCTTGTTGGTGAATCTGATTCAGAGCTTCTAAAGGACTTCATTGATAAAGTTACTTCAGGCAGCGGGGATAGCATCTCACCCATAGTATTGTCACCAAGTTCTGATAAGTCCCATCGAACTGTAATCCATAATTTCTTCAAAGAGAAATTGAGATTCCTTGTCACAGACACTGTGGATGGAACGAATGCTTCGTCAAAATGTGTCCGTGTGAGATTTAATTCAGGAGGGCTGAATGACAGGGGCAGAAGTTCAAAGAAACGGAAAGACAGAGGTGATAAGGCATTTGATAGCAGGGGTGCAAGCAGTTGGCCAGAGCATCTTGGCAGATTTCTTAGATTTCATCTATGCAAAGAGAACAAGGATACGCAAGAAGTCTTAGGGTTAATTGGAAGAATGCTTGGTGTCCAGCCAAGATCATTTGGGTTTGCGGGCACAAAAGATAAGCGGTCTGTCTCAACTCAAAGGGTAACTGTTTTCAAGCAGCATGCAAGTCGCTTGGCTGCTCTAAATGACCGGTTGATCGGTATTAAAGTGGGCGACTTCAGCTATGTGAAGGAAGGAATTGTGCTTGGACAGCTTTTTGGAAACCGTTTCACTGTCACTTTGCGGGGAGTTATTGCAGAATTGGATGATACCATTGAAGCATCTGCAGATGCCTTGGGGAGGTGTGGATTCATCAACTACTTTGGTTTACAGCGTTTTGGCTCAGGTTCCGTGCCAACTCACCTCATTGGTGCTACATTACTTCGAGGGGAGTGGGAAACAGCCGTAAACCTGATTCTTGATCCAAGAGAAGGGGAAAGGCATGAGATAAATAATGCACGAGAATATTACAAGGAAAGCCATGATATTGAAGGAACCCTAAGGCGACTACCACGTCATCTGGTGGCTGAAAGGGCCATACTTCAATGTTTGAAGAAATGTCCAGGGAACTACTTGCAAGCCCTGACAGCCATACCTAGGACTTTGAGAATGATGTATGTTCATAGTTATCAAAGCTACTTGTGGAACCATGCGGCAAGTGAGAGAATTCAGAAATATGGAACTGACTATGTTGTTCCAGGAGACTTGGTATATTGCGAAGGAGATGATAATGAAAAATTTAGTTCTGAATGTGAATACAACAACGGTGATGACTCTTATGATCAGAGCCAGTTAGACGAAATTTCTGGACCAGATCTTCATGAGAGAAGAAGTACCACAGTCAAGGCGTTGACTGCAGAAGATATTCACTCTGGAAACTACACTATTTATGATATTCTTCTTCCAATGCCTGGTTCTAGGGTAATTTTTCCAGGCAATGATGTTGCGCAAGTGTATCATGATTTTGCAAAGAAGGATGGGATCAATCTGTCTGAGAGCACACATCGTGTCAAGGAGTTTTCGATCACCAGTATGAATGGAAGTTATAGACAAGTTTTTCAGAAGCCATTGAATTTTGAATGGGAATTACTCACTTATACTGATGTTAATATATCGTTGACGGAGACAGATCTGGACAAGATCGCCAAGACTGAATCTGTCAATATAGTCAAAGAAGACACATCGGCCAATGGAAGTAGGGGAATGGATTCACTAGATTGCTTGAAACAATCAGAGAGCTTTGAAAATGATATAAAGCTTACAACAGATACCAGCGAGGCAGAGAGTGAGAATGCAGGGCTGTCACAAGTTGAATCCCAATGCGGTTCTAACTCTCAAGAGGTGCAAAAGGCTCTGAAGTTAAGCTTTACCCTTCCAGCTTCATGTTATGCAACCATGGCCATAAGGGAGTTACTGAAAACGTCAACTTCTGTTGCATTCCACAAGACTTTAAACCAGTGA
Protein:  
MKSLDEADVGIFCFMSQLPGFRGILKQRYSDFVVNEVDTDGNVVHLTCLDAPLEVVEENDAKRPDSNLMTRSYASEVEAFKSLVGESDSELLKDFIDKVTSGSGDSISPIVLSPSSDKSHRTVIHNFFKEKLRFLVTDTVDGTNASSKCVRVRFNSGGLNDRGRSSKKRKDRGDKAFDSRGASSWPEHLGRFLRFHLCKENKDTQEVLGLIGRMLGVQPRSFGFAGTKDKRSVSTQRVTVFKQHASRLAALNDRLIGIKVGDFSYVKEGIVLGQLFGNRFTVTLRGVIAELDDTIEASADALGRCGFINYFGLQRFGSGSVPTHLIGATLLRGEWETAVNLILDPREGERHEINNAREYYKESHDIEGTLRRLPRHLVAERAILQCLKKCPGNYLQALTAIPRTLRMMYVHSYQSYLWNHAASERIQKYGTDYVVPGDLVYCEGDDNEKFSSECEYNNGDDSYDQSQLDEISGPDLHERRSTTVKALTAEDIHSGNYTIYDILLPMPGSRVIFPGNDVAQVYHDFAKKDGINLSESTHRVKEFSITSMNGSYRQVFQKPLNFEWELLTYTDVNISLTETDLDKIAKTESVNIVKEDTSANGSRGMDSLDCLKQSESFENDIKLTTDTSEAESENAGLSQVESQCGSNSQEVQKALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLNQ